Review



pdcas9dnmt3a egfp  (Addgene inc)


Bioz Verified Symbol Addgene inc is a verified supplier  
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
  • 93

    Structured Review

    Addgene inc pdcas9dnmt3a egfp
    Pdcas9dnmt3a Egfp, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 33 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pm41620608-256-17-18
    Average 93 stars, based on 33 article reviews
    pdcas9dnmt3a egfp - by Bioz Stars, 2026-09
    93/100 stars

    Images

    Related Articles

    Plasmid Preparation:

    Article Title: Systematic comparison of dCas9-based DNA methylation epimodifiers over time indicates efficient on-target and widespread off-target effects
    Article Snippet: The same procedure was applied to the control tool, consisting of dCas9 fused with the inactive DNMT3A (M3-dCAS9-DNMT3A, Addgene #220237). .. M3-dCAS9-DNMT3A-DNMT3A (dCas9-3A-3A, Addgene #218776) plasmid made by the amplification of the human DNMT3A catalytic domain from the pdCas9-DNMT3A-EGFP (Addgene #71666) plasmid using the primers containing the FseI restriction sites. .. For M3-dCAS9-DNMT3A-DNMT3L (dCas9-3A-3L, Addgene #218777), the murine DNMT3L catalytic domain and 27bp linker included FseI restriction site were amplified from pET28-Dnmt3a3L-sc27 plasmid (Addgene #71827).

    Article Title: The dCas9-based genome editing in Plasmodium yoelii
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu ), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Article Title: VIM-AS1 , which is regulated by CpG methylation, cooperates with IGF2BP1 to inhibit tumor aggressiveness via EPHA3 degradation in hepatocellular carcinoma
    Article Snippet: .. pdCas9-DNMT3A-EGFP was a gift from Vlatka Zoldoš (Addgene, Plasmid # 71666). .. The guide RNA (gRNA) sequences were annealed and inserted into the plasmid via the BbsI sites and T4 DNA ligase. pPlatTET-gRNA2 was a gift from Izuho Hatada (Addgene, Plasmid #82559).

    Article Title: The dCas9-based genome editing in Plasmodium yoelii .
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Article Title: p21 Promoter Methylation Is Vital for the Anticancer Activity of Withaferin A
    Article Snippet: In experiments designed for targeted demethylation of promoters, we utilized pINDUCER dCas9-TET1CD, which was a gift from Danwei Huangfu (Addgene plasmid #101921; https://www.addgene.org/101921/ (accessed on 8 February 2024); RRID:Addgene_101921; RRID:Addgene_129025) [61]. .. In experiments designed for targeted methylation of promoters, we employed pdCas9-DNMT3A-EGFP, a gift from Vlatka Zoldoš (Addgene plasmid #71666; https://www.addgene.org/71666/ (accessed on 8 February 2024); RRID:Addgene_71666) [62]. .. All CRISPR experiments also utilized the pDECKO_mCherry plasmid (pDECKO), which was a gift from Roderic Guigo and Rory Johnson (Addgene plasmid #78535; https://www.addgene.org/78535/; (accessed on 8 February 2024) RRID:Addgene_78535) [63].

    Article Title: p21 Promoter Methylation Is Vital for the Anticancer Activity of Withaferin A
    Article Snippet: In experiments designed for targeted demethylation of promoters, we utilized pINDUCER dCas9-TET1CD, which was a gift from Danwei Huangfu (Addgene plasmid #101921; https://www.addgene.org/101921/ (accessed on 8 February 2024); RRID:Addgene_101921; RRID:Addgene_129025) [ ]. .. In experiments designed for targeted methylation of promoters, we employed pdCas9-DNMT3A-EGFP, a gift from Vlatka Zoldoš (Addgene plasmid #71666; https://www.addgene.org/71666/ (accessed on 8 February 2024); RRID:Addgene_71666) [ ]. .. All CRISPR experiments also utilized the pDECKO_mCherry plasmid (pDECKO), which was a gift from Roderic Guigo and Rory Johnson (Addgene plasmid #78535; https://www.addgene.org/78535/ ; (accessed on 8 February 2024) RRID:Addgene_78535) [ ].

    Amplification:

    Article Title: Systematic comparison of dCas9-based DNA methylation epimodifiers over time indicates efficient on-target and widespread off-target effects
    Article Snippet: The same procedure was applied to the control tool, consisting of dCas9 fused with the inactive DNMT3A (M3-dCAS9-DNMT3A, Addgene #220237). .. M3-dCAS9-DNMT3A-DNMT3A (dCas9-3A-3A, Addgene #218776) plasmid made by the amplification of the human DNMT3A catalytic domain from the pdCas9-DNMT3A-EGFP (Addgene #71666) plasmid using the primers containing the FseI restriction sites. .. For M3-dCAS9-DNMT3A-DNMT3L (dCas9-3A-3L, Addgene #218777), the murine DNMT3L catalytic domain and 27bp linker included FseI restriction site were amplified from pET28-Dnmt3a3L-sc27 plasmid (Addgene #71827).

    Article Title: The dCas9-based genome editing in Plasmodium yoelii
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu ), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Article Title: The dCas9-based genome editing in Plasmodium yoelii .
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Methylation:

    Article Title: Genome-wide DNA hypermethylation opposes healing in patients with chronic wounds by impairing epithelial-mesenchymal transition
    Article Snippet: .. Crisper/Cas9-mediated targeted DNA methylation/demethylation. pdCas9-DNMT3A-EGFP and pdCas9-DNMT3A-EGFP (ANV) was a gift from Vlatka Zoldoš (University of Zagreb, Zagreb, Croatia) (Addgene plasmids 71666 and 71685) (46). .. In this plasmid, the catalytic domain of human DNMT3A (amino acids P602-V912) was derived from the plasmid pcDNA3/Myc-DNMT3A (Addgene plasmid 35521) (106).

    Article Title: p21 Promoter Methylation Is Vital for the Anticancer Activity of Withaferin A
    Article Snippet: In experiments designed for targeted demethylation of promoters, we utilized pINDUCER dCas9-TET1CD, which was a gift from Danwei Huangfu (Addgene plasmid #101921; https://www.addgene.org/101921/ (accessed on 8 February 2024); RRID:Addgene_101921; RRID:Addgene_129025) [61]. .. In experiments designed for targeted methylation of promoters, we employed pdCas9-DNMT3A-EGFP, a gift from Vlatka Zoldoš (Addgene plasmid #71666; https://www.addgene.org/71666/ (accessed on 8 February 2024); RRID:Addgene_71666) [62]. .. All CRISPR experiments also utilized the pDECKO_mCherry plasmid (pDECKO), which was a gift from Roderic Guigo and Rory Johnson (Addgene plasmid #78535; https://www.addgene.org/78535/; (accessed on 8 February 2024) RRID:Addgene_78535) [63].

    Article Title: p21 Promoter Methylation Is Vital for the Anticancer Activity of Withaferin A
    Article Snippet: In experiments designed for targeted demethylation of promoters, we utilized pINDUCER dCas9-TET1CD, which was a gift from Danwei Huangfu (Addgene plasmid #101921; https://www.addgene.org/101921/ (accessed on 8 February 2024); RRID:Addgene_101921; RRID:Addgene_129025) [ ]. .. In experiments designed for targeted methylation of promoters, we employed pdCas9-DNMT3A-EGFP, a gift from Vlatka Zoldoš (Addgene plasmid #71666; https://www.addgene.org/71666/ (accessed on 8 February 2024); RRID:Addgene_71666) [ ]. .. All CRISPR experiments also utilized the pDECKO_mCherry plasmid (pDECKO), which was a gift from Roderic Guigo and Rory Johnson (Addgene plasmid #78535; https://www.addgene.org/78535/ ; (accessed on 8 February 2024) RRID:Addgene_78535) [ ].

    CRISPR:

    Article Title: The dCas9-based genome editing in Plasmodium yoelii
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu ), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Article Title: The dCas9-based genome editing in Plasmodium yoelii .
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Synthesized:

    Article Title: The dCas9-based genome editing in Plasmodium yoelii
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu ), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Article Title: The dCas9-based genome editing in Plasmodium yoelii .
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Construct:

    Article Title: The dCas9-based genome editing in Plasmodium yoelii
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu ), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..

    Article Title: The dCas9-based genome editing in Plasmodium yoelii .
    Article Snippet: .. The guide RNA (gRNA) was designed upstream of the protospacer-adjacent motif (PAM), using the online CRISPR guide RNA/DNA design tool for eukaryotic pathogens (EuPaGDT; http://grna.ctegd.uga.edu), and a pair of complementary oligonucleotides were synthesized for each target site (Sangon Biotech, China). dCas9 nuclease coding fragment was amplified from pdCas9-DNMT3A-EGFP (Addgene Plasmid #71666) and replaced Cas9 nuclease coding fragment of the pDEF-SpCas9GFP (Addgene Plasmid #129523), then MCP-RecT coding fragment amplified from Addgene Plasmid #164803 and MS2-BB_BbsI fragment amplified from Addgene Plasmid #164802 were inserted, and finally the plasmid pDEF-dCas9-MCP-RecT-MS2-BB_BbsI was constructed. ..



    Similar Products

    93
    Addgene inc pdcas9dnmt3a egfp
    Pdcas9dnmt3a Egfp, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pm41620608-256-17-18
    Average 93 stars, based on 1 article reviews
    pdcas9dnmt3a egfp - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    93
    Addgene inc human dnmt3a catalytic domain
    Human Dnmt3a Catalytic Domain, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pm41620608-256-11-18
    Average 93 stars, based on 1 article reviews
    human dnmt3a catalytic domain - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    93
    Addgene inc selection control group
    Selection Control Group, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pmc12443320__pone%2E0331190%2Es012-1-136-145
    Average 93 stars, based on 1 article reviews
    selection control group - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    93
    Addgene inc plasmids
    Plasmids, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pmc12443320-76-28-24
    Average 93 stars, based on 1 article reviews
    plasmids - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    93
    Addgene inc io n dcas9dnmt3a treated cells
    Io N Dcas9dnmt3a Treated Cells, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pmc12443320__pone%2E0331190%2Es012-1-114-145
    Average 93 stars, based on 1 article reviews
    io n dcas9dnmt3a treated cells - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    93
    Addgene inc addgene 71666
    Aa) Graphic representation of a regulatory region in the PRAME locus containing a CpG island, which may be involved in the regulation of transcription of PRAME-AS gene. Ab) Schematic illustration of dCas9-DNMT3A effectors targeting a CpG island using two specific sgRNAs that bind 25–35 bp downstream (the effective range for a fully methylated state) of the PAM sequences . The position of CpG dinucleotides is shown relative to the nearest sgRNA and to the PRAME transcriptional start site. The thickness and higher color intensity of the brown arrows correspond to the higher DNMT3A activity. B) Cells transfected with the construct encoding <t>dCas9-DNMT3A-T2A-EGFP</t> <t>(Addgene</t> <t>#71666)</t> (Scale bar: 100 µm). C) Cells transfected with constructs encoding dCas9-DNMT3A-T2A-EGFP and sgRNA#1 (pHD_71666-1) and dCas9-DNMT3A-T2A-EGFP and sgRNA#2 (pHD_71666-2). (Scale bar: 100 µm). D) Sanger sequencing of the bisulfite-treated genomic DNA from cells transfected with pHD_71666-1 (dCas9-DNMT3A + sgRNA # 1) and pHD_71666-2 (dCas9-DNMT3A + sgRNA # 2) compared with un-transfected cells with baseline methylation levels. E) RT-qPCR results after normalization by ACTB reference gene reveal a drop of PRAME (n = 5 in control cell line and n = 6 in dCas9-DNMT3A- treated cells) and PRAME-AS lncRNA (n = 4) transcripts after hypermethylation. The data was gathered from three biological replicates, represented as median and range, and statistically analyzed by Mann-Whitney U-test.
    Addgene 71666, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pmc12443320-21-0-0
    Average 93 stars, based on 1 article reviews
    addgene 71666 - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    93
    Addgene inc cmv promoter enhancer
    Aa) Graphic representation of a regulatory region in the PRAME locus containing a CpG island, which may be involved in the regulation of transcription of PRAME-AS gene. Ab) Schematic illustration of dCas9-DNMT3A effectors targeting a CpG island using two specific sgRNAs that bind 25–35 bp downstream (the effective range for a fully methylated state) of the PAM sequences . The position of CpG dinucleotides is shown relative to the nearest sgRNA and to the PRAME transcriptional start site. The thickness and higher color intensity of the brown arrows correspond to the higher DNMT3A activity. B) Cells transfected with the construct encoding <t>dCas9-DNMT3A-T2A-EGFP</t> <t>(Addgene</t> <t>#71666)</t> (Scale bar: 100 µm). C) Cells transfected with constructs encoding dCas9-DNMT3A-T2A-EGFP and sgRNA#1 (pHD_71666-1) and dCas9-DNMT3A-T2A-EGFP and sgRNA#2 (pHD_71666-2). (Scale bar: 100 µm). D) Sanger sequencing of the bisulfite-treated genomic DNA from cells transfected with pHD_71666-1 (dCas9-DNMT3A + sgRNA # 1) and pHD_71666-2 (dCas9-DNMT3A + sgRNA # 2) compared with un-transfected cells with baseline methylation levels. E) RT-qPCR results after normalization by ACTB reference gene reveal a drop of PRAME (n = 5 in control cell line and n = 6 in dCas9-DNMT3A- treated cells) and PRAME-AS lncRNA (n = 4) transcripts after hypermethylation. The data was gathered from three biological replicates, represented as median and range, and statistically analyzed by Mann-Whitney U-test.
    Cmv Promoter Enhancer, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pm40593675-412-28-33
    Average 93 stars, based on 1 article reviews
    cmv promoter enhancer - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    93
    Addgene inc dcas9 dnmt3a t2a egfp expression
    Aa) Graphic representation of a regulatory region in the PRAME locus containing a CpG island, which may be involved in the regulation of transcription of PRAME-AS gene. Ab) Schematic illustration of dCas9-DNMT3A effectors targeting a CpG island using two specific sgRNAs that bind 25–35 bp downstream (the effective range for a fully methylated state) of the PAM sequences . The position of CpG dinucleotides is shown relative to the nearest sgRNA and to the PRAME transcriptional start site. The thickness and higher color intensity of the brown arrows correspond to the higher DNMT3A activity. B) Cells transfected with the construct encoding <t>dCas9-DNMT3A-T2A-EGFP</t> <t>(Addgene</t> <t>#71666)</t> (Scale bar: 100 µm). C) Cells transfected with constructs encoding dCas9-DNMT3A-T2A-EGFP and sgRNA#1 (pHD_71666-1) and dCas9-DNMT3A-T2A-EGFP and sgRNA#2 (pHD_71666-2). (Scale bar: 100 µm). D) Sanger sequencing of the bisulfite-treated genomic DNA from cells transfected with pHD_71666-1 (dCas9-DNMT3A + sgRNA # 1) and pHD_71666-2 (dCas9-DNMT3A + sgRNA # 2) compared with un-transfected cells with baseline methylation levels. E) RT-qPCR results after normalization by ACTB reference gene reveal a drop of PRAME (n = 5 in control cell line and n = 6 in dCas9-DNMT3A- treated cells) and PRAME-AS lncRNA (n = 4) transcripts after hypermethylation. The data was gathered from three biological replicates, represented as median and range, and statistically analyzed by Mann-Whitney U-test.
    Dcas9 Dnmt3a T2a Egfp Expression, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pmc12217943-406-8-16
    Average 93 stars, based on 1 article reviews
    dcas9 dnmt3a t2a egfp expression - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    93
    Addgene inc plasmid expressing dcas3 dnmt3a
    Aa) Graphic representation of a regulatory region in the PRAME locus containing a CpG island, which may be involved in the regulation of transcription of PRAME-AS gene. Ab) Schematic illustration of dCas9-DNMT3A effectors targeting a CpG island using two specific sgRNAs that bind 25–35 bp downstream (the effective range for a fully methylated state) of the PAM sequences . The position of CpG dinucleotides is shown relative to the nearest sgRNA and to the PRAME transcriptional start site. The thickness and higher color intensity of the brown arrows correspond to the higher DNMT3A activity. B) Cells transfected with the construct encoding <t>dCas9-DNMT3A-T2A-EGFP</t> <t>(Addgene</t> <t>#71666)</t> (Scale bar: 100 µm). C) Cells transfected with constructs encoding dCas9-DNMT3A-T2A-EGFP and sgRNA#1 (pHD_71666-1) and dCas9-DNMT3A-T2A-EGFP and sgRNA#2 (pHD_71666-2). (Scale bar: 100 µm). D) Sanger sequencing of the bisulfite-treated genomic DNA from cells transfected with pHD_71666-1 (dCas9-DNMT3A + sgRNA # 1) and pHD_71666-2 (dCas9-DNMT3A + sgRNA # 2) compared with un-transfected cells with baseline methylation levels. E) RT-qPCR results after normalization by ACTB reference gene reveal a drop of PRAME (n = 5 in control cell line and n = 6 in dCas9-DNMT3A- treated cells) and PRAME-AS lncRNA (n = 4) transcripts after hypermethylation. The data was gathered from three biological replicates, represented as median and range, and statistically analyzed by Mann-Whitney U-test.
    Plasmid Expressing Dcas3 Dnmt3a, supplied by Addgene inc, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/pdcas9+dnmt3a+egfp/pdCas9-DNMT3A-EGFP+(Plasmid+%2371666)/pmc12217943__41467_2025_60831_MOESM1_ESM-20-18-21
    Average 93 stars, based on 1 article reviews
    plasmid expressing dcas3 dnmt3a - by Bioz Stars, 2026-09
    93/100 stars
      Buy from Supplier

    Image Search Results


    Aa) Graphic representation of a regulatory region in the PRAME locus containing a CpG island, which may be involved in the regulation of transcription of PRAME-AS gene. Ab) Schematic illustration of dCas9-DNMT3A effectors targeting a CpG island using two specific sgRNAs that bind 25–35 bp downstream (the effective range for a fully methylated state) of the PAM sequences . The position of CpG dinucleotides is shown relative to the nearest sgRNA and to the PRAME transcriptional start site. The thickness and higher color intensity of the brown arrows correspond to the higher DNMT3A activity. B) Cells transfected with the construct encoding dCas9-DNMT3A-T2A-EGFP (Addgene #71666) (Scale bar: 100 µm). C) Cells transfected with constructs encoding dCas9-DNMT3A-T2A-EGFP and sgRNA#1 (pHD_71666-1) and dCas9-DNMT3A-T2A-EGFP and sgRNA#2 (pHD_71666-2). (Scale bar: 100 µm). D) Sanger sequencing of the bisulfite-treated genomic DNA from cells transfected with pHD_71666-1 (dCas9-DNMT3A + sgRNA # 1) and pHD_71666-2 (dCas9-DNMT3A + sgRNA # 2) compared with un-transfected cells with baseline methylation levels. E) RT-qPCR results after normalization by ACTB reference gene reveal a drop of PRAME (n = 5 in control cell line and n = 6 in dCas9-DNMT3A- treated cells) and PRAME-AS lncRNA (n = 4) transcripts after hypermethylation. The data was gathered from three biological replicates, represented as median and range, and statistically analyzed by Mann-Whitney U-test.

    Journal: PLOS One

    Article Title: PRAME-AS lncRNA, regulated by MZF1, modulates PRAME expression and cell stemness

    doi: 10.1371/journal.pone.0331190

    Figure Lengend Snippet: Aa) Graphic representation of a regulatory region in the PRAME locus containing a CpG island, which may be involved in the regulation of transcription of PRAME-AS gene. Ab) Schematic illustration of dCas9-DNMT3A effectors targeting a CpG island using two specific sgRNAs that bind 25–35 bp downstream (the effective range for a fully methylated state) of the PAM sequences . The position of CpG dinucleotides is shown relative to the nearest sgRNA and to the PRAME transcriptional start site. The thickness and higher color intensity of the brown arrows correspond to the higher DNMT3A activity. B) Cells transfected with the construct encoding dCas9-DNMT3A-T2A-EGFP (Addgene #71666) (Scale bar: 100 µm). C) Cells transfected with constructs encoding dCas9-DNMT3A-T2A-EGFP and sgRNA#1 (pHD_71666-1) and dCas9-DNMT3A-T2A-EGFP and sgRNA#2 (pHD_71666-2). (Scale bar: 100 µm). D) Sanger sequencing of the bisulfite-treated genomic DNA from cells transfected with pHD_71666-1 (dCas9-DNMT3A + sgRNA # 1) and pHD_71666-2 (dCas9-DNMT3A + sgRNA # 2) compared with un-transfected cells with baseline methylation levels. E) RT-qPCR results after normalization by ACTB reference gene reveal a drop of PRAME (n = 5 in control cell line and n = 6 in dCas9-DNMT3A- treated cells) and PRAME-AS lncRNA (n = 4) transcripts after hypermethylation. The data was gathered from three biological replicates, represented as median and range, and statistically analyzed by Mann-Whitney U-test.

    Article Snippet: Addgene #71666 , U6-CMV-3Flag-NLS-dCas9-NLS-DNMT3a-T2A-EGFP-PA , Encoding dCas9-DNMT3a & EGFP; used as negative control for hypermethylation , [ ] .

    Techniques: Methylation, Activity Assay, Transfection, Construct, Sequencing, Quantitative RT-PCR, Control, MANN-WHITNEY